 | Allegheny woodrat | Neotoma magister | (Muridae) |
| American water shrew | Sorex palustris | |
| Appalachian cottontail | Sylvilagus obscurus | (Leporidae) |
| ashen masked shrew | Sorex cinereus cinereus | |
| beaver | Castor canadensis | |
 | Big Brown Bat | Eptesicus fuscus | |
| Black Bear | Ursus americanus americanus | |
| black rat | Rattus rattus | (Muridae) |
| black-tailed jackrabbit | Lepus californicus | (Leporidae) |
| bobcat | Lynx rufus rufus | |
 | Brazilian Free-tailed Bat | Tadarida brasiliensis | |
| Carolina beaver | Castor canadensis carolinensis | |
| Carolina Gapper’s red-backed vole | Clethrionomys gapperi carolinensis | |
| Carolina northern flying squirrel | Glaucomys sabrinus coloratus | |
| coastal Gapper’s red-backed vole | Clethrionomys gapperi maurus | |
 | common eastern chipmunk | Tamias striatus striatus | (Sciuridae) |
| common Gapper’s red-backed vole | Clethrionomys gapperi gapperi | |
| common golden mouse | Ochrotomys nuttalli aureolus | |
| common mink | Mustela vison mink | (Mustelidae) |
| common muskrat | Ondatra zibethicus zibethicus | |
| common pine vole | Microtus pinetorum pinetorum | |
| common white-footed mouse | Peromyscus leucopus leucopus | |
| cotton mouse | Peromyscus gossypinus gossypinus | |
 | coyote | Canis latrans | (Canidae) |
| dark meadow vole | Microtus pennsylvanicus nigrans | (Cricetidae) |
| deer mouse | Peromyscus maniculatus nubiterre | |
| Delmarva Peninsula fox squirrel | Sciurus niger cinereus | |
| Dismal Swamp short-tailed shrew | Blarina brevicauda telmalestes | |
| Dismal Swamp southeastern shrew | Sorex longisrostris fisheri | (Soricidae) |
 | eastern cottontail | Sylvilagus floridanus mallurus | (Leporidae) |
| eastern cougar (puma) | Puma (=Felis) concolor cougar | (Felidae) |
| eastern gray fox | Urocyon cinereoargenteneus cinereoargenteneus | |
| eastern harvest mouse | Reithrodontomys humulis humulis | |
| eastern harvest mouse | Reithrodontomys humulis virginianus | |
| eastern mole | Scalopus aquaticus aquaticus | |
 | eastern pipistrelle (Tri-colored bat) | Pipistrellus subflavus subflavus | (Vespertilionidae) |
 | Eastern Red Bat | Lasiurus borealis | |
 | Eastern Small-footed Bat | Myotis leibii | |
| eastern small-footed myotis | Myotis leibii | |
 | Eastern Spotted Skunk | Spilogale putorius putorius | (Mephitidae) |
 | Elk | Cervus canadensis | (Cervidae) |
 | Evening Bat | Nycticeius humeralis | |
| fisher | Martes pennanti pennanti | (Mustelidae) |
| Fisher’s eastern chipmunk | Tamias striatus fisheri | (Sciuridae) |
 | Florida bobcat | Lynx rufus floridanus | (Felidae) |
| fox squirrel | Sciurus niger vulpinus | (Sciuridae) |
 | Gray Bat | Myotis grisescens | |
 | gray squirrel | Sciurus carolinensis carolinensis | (Sciuridae) |
| gray wolf | Canis lupus | (Canidae) |
| hairy-tailed mole | Parascolops breweri | (Talpidae) |
| hispid cotton rat | Sigmodon hispidus virginianus | |
 | Hoary Bat | Lasiurus cinereus | |
| house mouse | Mus musculus musculus | (Cricetidae) |
| Howell’s eastern mole | Scalopus aquaticus howelli | (Talpidae) |
 | Indiana Bat | Myotis sodalis | |
| Kirtland’s short-tailed shrew | Blarina brevicauda kirtlandi | (Soricidae) |
| large-toothed muskrat | Ondatra zibethicus macrodon | |
| least shrew | Cryptotis parva parva | (Soricidae) |
| least weasel | Mustela nivalis allegheniensis | (Mustelidae) |
| Lewis’ golden mouse | Ochrotomys nuttalli nuttalli | (Cricetidae) |
 | Little Brown Bat | Myotis lucifugus | |
| long-tailed (=rock) shrew | Sorex dispar dispar | |
| long-tailed weasel | Mustela frenata noveboracensis | (Mustelidae) |
| marsh rabbit | Sylvilagus palustris palustris | (Leporidae) |
| marsh rice rat | Oryzomys palustris palustris | |
| masked shrew | Sorex cinereus fontinalis | |
| meadow jumping mouse | Zapus hudsonius americanus | |
| meadow vole | Microtus pennsylvanicus pennsylvanicus | |
| Mearn’s eastern cottontail | Sylvilagus floridanus mearnsii | (Leporidae) |
| northern gray squirrel | Sciurus carolinensis pennsylvanicus | (Sciuridae) |
 | Northern Long eared bat | Myotis septentrionalis septentrionalis | (Vespertilionidae) |
| Northern Long-eared Bat | Myotis septentrionalis | |
 | northern river otter | Lontra canadensis laxatina | (Mustelidae) |
| northern white-footed mouse | Peromyscus leucopus noveboracensis | |
 | Northern Yellow Bat | Lasiurus intermedius | |
| Norway rat | Rattus norvegicus norvegicus | |
| nothern short-tailed shrew | Blarina brevicauda churchi | (Soricidae) |
| nutria | Myocastor coypus | |
| pine vole | Microtus pinetorum scalapsoides | |
| pine vole | Microtus pinetorum carbonarius | (Cricetidae) |
| porcupine | Erithizon dorsatum dorsatum | |
| prairie deer mouse | Peromyscus maniculatus bairdii | (Cricetidae) |
| Pungo white-footed mouse | Peromyscus leucopus easti | (Cricetidae) |
| pygmy shrew | Sorex hoyi winnemana | (Soricidae) |
 | raccoon | Procyon lotor lotor | (Procyonidae) |
| raccoon | Procyon lotor martitimus | (Procyonidae) |
 | Rafinesque’s Big-eared Bat | Corynorhinus rafinesquii | |
 | Red fox | Vulpes vulpes fulva | (Canidae) |
 | red squirrel | Tamiasciurus hudsonicus abieticola | (Sciuridae) |
| reddish fox squirrel | Sciurus niger rufiventer | (Sciuridae) |
| rock vole | Microtus chrotorrhinus | (Cricetidae) |
 | Seminole Bat | Lasiurus seminolus | |
| sika deer | Cervus nippon nippon | (Cervidae) |
 | Silver-haired Bat | Lasionycteris noctivagans | |
| Smith’s island cottontail | Sylvilagus floridanus hitchensis | (Leporidae) |
| smoky shrew | Sorex fumeus fumeus | |
| snowshoe hare | Lepus americanus virginianus | (Leporidae) |
| snowshoe hare | Lepus americanus | |
 | Southeastern Bat | Myotis austroriparius | |
| southeastern fox squirrel | Sciurus niger niger | |
| southeastern myotis | Myotis austroriparius | (Vespertilionidae) |
| southeastern shrew | Sorex longirostris longirostris | (Soricidae) |
| southern bog lemming | Synaptomys cooperi helaletes | (Cricetidae) |
| southern flying squirrel | Glaucomys volans volans | |
| southern flying squirrel | Glaucomys volans saturatus | (Sciuridae) |
| southern short-tailed shrew | Blarina carilonensis carilonensis | (Soricidae) |
| southwestern mink | Mustela vison vison | (Mustelidae) |
| star-nosed mole | Condylura cristata cristata | |
| star-nosed mole | Condylura cristata parva | (Talpidae) |
| Stone’s southern bog lemming | Synaptomys cooperi stonei | (Cricetidae) |
| striped skunk | Mephitis mephitis nigra | (Mephitidae) |
| striped skunk | Mephitis mephitis mephitis | (Mephitidae) |
| talkative red squirrel | Tamiasciurus hudsonicus loquax | (Sciuridae) |
| Tri-colored Bat | Perimyotis subflavus | |
 | Virginia Big-eared Bat | Corynorhinus townsendii virginianus | |
| Virginia northern flying squirrel | Glaucomys sabrinus fuscus | |
| Virginia opossum | Didelphis virginiana virginiana | |
 | white-tailed deer | Odocoileus virginianus | (Cervidae) |
| woodchuck (Groundhog) | Marmota monax monax | (Sciuridae) |
| woodland jumping mouse | Napaeozapus insignis roanensis | |
| woodland jumping mouse | Napaeozapus insignis insignis | (Zapodidae) |
